grdgradient (1) - Linux Man Pages
grdgradient: Compute directional derivative or gradient from a grid
NAMEgrdgradient - Compute directional derivative or gradient from a grid
grdgradient in_grdfile out_grdfile [ azim[/azim2] ] [ [a][c][o][n] ] [ [s|p]azim/elev[/ambient/diffuse/specular/shine] ] [ flag ] [ [e][t][amp][/sigma[/offset]] ] [ region ] [ slopefile ] [ [level] ] [ -fg ] [ -n<flags> ]
grdgradient may be used to compute the directional derivative in a given direction (-A), or the direction (-S) [and the magnitude (-D)] of the vector gradient of the data.
- 2-D grid file from which to compute directional derivative. (See GRID FILE FORMATS below).
- Name of the output grid file for the directional derivative. (See GRID FILE FORMATS below).
- Azimuthal direction for a directional derivative; azim is the angle in the x,y plane measured in degrees positive clockwise from north (the +y direction) toward east (the +x direction). The negative of the directional derivative, -[dz/dx*sin(azim) + dz/dy*cos(azim)], is found; negation yields positive values when the slope of z(x,y) is downhill in the azim direction, the correct sense for shading the illumination of an image (see grdimage and grdview) by a light source above the x,y plane shining from the azim direction. Optionally, supply two azimuths, -Aazim/azim2, in which case the gradients in each of these directions are calculated and the one larger in magnitude is retained; this is useful for illuminating data with two directions of lineated structures, e.g., -A0/270 illuminates from the north (top) and west (left).
- Find the direction of the positive (up-slope) gradient of the data. To instead find the aspect (the down-slope direction), use -Da. By default, directions are measured clockwise from north, as azim in -A above. Append c to use conventional Cartesian angles measured counterclockwise from the positive x (east) direction. Append o to report orientations (0-180) rather than directions (0-360). Append n to add 90 degrees to all angles (e.g., to give local strikes of the surface ).
- Compute Lambertian radiance appropriate to use with grdimage and grdview. The Lambertian Reflection assumes an ideal surface that reflects all the light that strikes it and the surface appears equally bright from all viewing directions. azim and elev are the azimuth and elevation of light vector. Optionally, supply ambient diffuse specular shine which are parameters that control the reflectance properties of the surface. Default values are: 0.55/0.6/0.4/10 To leave some of the values untouched, specify = as the new value. For example -E60/30/=/0.5 sets the azim elev and diffuse to 60, 30 and 0.5 and leaves the other reflectance parameters untouched. Append s to use a simpler Lambertian algorithm. Note that with this form you only have to provide the azimuth and elevation parameters. Append p to use the Peucker piecewise linear approximation (simpler but faster algorithm; in this case the azim and elev are hardwired to 315 and 45 degrees. This means that even if you provide other values they will be ignored.)
- Boundary condition flag may be x or y or xy indicating data is periodic in range of x or y or both, or flag may be g indicating geographical conditions (x and y are lon and lat). [Default uses "natural" conditions (second partial derivative normal to edge is zero).]
- Normalization. [Default: no normalization.] The actual gradients g are offset and scaled to produce normalized gradients gn with a maximum output magnitude of amp. If amp is not given, default amp = 1. If offset is not given, it is set to the average of g. -N yields gn = amp * (g - offset)/max(abs(g - offset)). -Ne normalizes using a cumulative Laplace distribution yielding gn = amp * (1.0 - exp(sqrt(2) * (g - offset)/ sigma)) where sigma is estimated using the L1 norm of (g - offset) if it is not given. -Nt normalizes using a cumulative Cauchy distribution yielding gn = (2 * amp / PI) * atan( (g - offset)/ sigma) where sigma is estimated using the L2 norm of (g - offset) if it is not given.
- -R[unit]xmin/xmax/ymin/ymax[r] (more ...)
- Specify the region of interest. Using the -R option will select a subsection of in_grdfile grid. If this subsection exceeds the boundaries of the grid, only the common region will be extracted.
- Name of output grid file with scalar magnitudes of gradient vectors. Requires -D but makes -G optional.
- -V[level] (more ...)
- Select verbosity level [c].
- Geographic grids (dimensions of longitude, latitude) will be converted to meters via a "Flat Earth" approximation using the current ellipsoid parameters.
- -n[b|c|l|n][+a][+bBC][+c][+tthreshold] (more ...)
- Select interpolation mode for grids.
- -^ or just -
- Print a short message about the syntax of the command, then exits (NOTE: on Windows use just -).
- -+ or just +
- Print an extensive usage (help) message, including the explanation of any module-specific option (but not the GMT common options), then exits.
- -? or no arguments
- Print a complete usage (help) message, including the explanation of options, then exits.
- Print GMT version and exit.
- Print full path to GMT share directory and exit.
GRID DISTANCE UNITS
If the grid does not have meter as the horizontal unit, append +uunit to the input file name to convert from the specified unit to meter. If your grid is geographic, convert distances to meters by supplying -fg instead.
If you don't know what -N options to use to make an intensity file for grdimage or grdview, a good first try is -Ne0.6.
Usually 255 shades are more than enough for visualization purposes. You can save 75% disk space by appending =nb/a to the output filename out_grdfile.
If you want to make several illuminated maps of subregions of a large data set, and you need the illumination effects to be consistent across all the maps, use the -N option and supply the same value of sigma and offset to grdgradient for each map. A good guess is offset = 0 and sigma found by grdinfo -L2 or -L1 applied to an unnormalized gradient grd.
GRID FILE FORMATS
By default GMT writes out grid as single precision floats in a COARDS-complaint netCDF file format. However, GMT is able to produce grid files in many other commonly used grid file formats and also facilitates so called "packing" of grids, writing out floating point data as 1- or 2-byte integers. To specify the precision, scale and offset, the user should add the suffix =id[/scale/offset[/nan]], where id is a two-letter identifier of the grid type and precision, and scale and offset are optional scale factor and offset to be applied to all grid values, and nan is the value used to indicate missing data. In case the two characters id is not provided, as in =/scale than a id=nf is assumed. When reading grids, the format is generally automatically recognized. If not, the same suffix can be added to input grid file names. See grdconvert and Section grid-file-format of the GMT Technical Reference and Cookbook for more information.
When reading a netCDF file that contains multiple grids, GMT will read, by default, the first 2-dimensional grid that can find in that file. To coax GMT into reading another multi-dimensional variable in the grid file, append ?varname to the file name, where varname is the name of the variable. Note that you may need to escape the special meaning of ? in your shell program by putting a backslash in front of it, or by placing the filename and suffix between quotes or double quotes. The ?varname suffix can also be used for output grids to specify a variable name different from the default: "z". See grdconvert and Sections modifiers-for-CF and grid-file-format of the GMT Technical Reference and Cookbook for more information, particularly on how to read splices of 3-, 4-, or 5-dimensional grids.
To make a file for illuminating the data in geoid.nc using exp- normalized gradients in the range [-0.6,0.6] imitating light sources in the north and west directions:
gmt grdgradient geoid.nc -A0/270 -Ggradients.nc=nb/a -Ne0.6 -V
To find the azimuth orientations of seafloor fabric in the file topo.nc:
gmt grdgradient topo.nc -Dno -Gazimuths.nc -V
Horn, B.K.P., Hill-Shading and the Reflectance Map, Proceedings of the IEEE, Vol. 69, No. 1, January 1981, pp. 14-47. (http://people.csail.mit.edu/bkph/papers/Hill-Shading.pdf)
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