gamemode-simulate-game – simulate a game using gamemode Synopsisgamemode-simulate-game DescriptionGameMode is a daemon/lib combo for Linux that allows games to request a set of optimisations be temporarily applied to the host OS. The design has a clear cut abstraction between the host daemon and library (gamemoded and libgamemode), and the client loaders (libgamemodeauto and gamemode_client.h) that…
Galeon – gecko-based GNOME web browser Synopsisgaleon [OPTION…] [URL…] DescriptionGaleon is a GNOME web browser using the Mozilla rendering and networking engines. OptionsGaleon accepts the following options: Help options -?, –help Show summary of options. –usage Display brief usage message. GNOME options –disable-sound Disable sound server usage –enable-sound Enable sound server usage –espeaker=HOSTNAME:PORT Host:port on…
galculator – a GTK 2 based scientific calculator Synopsisgalculator [options] DescriptionThis manual page gives a short description of galculator and documents its command line arguments. galculator is a GTK 2 based calculator with basic and scientific modes. It supports algebraic notation, RPN (Reverse Polish Notation) and formula entry mode, different number bases (decimal, hexadecimal, octal,…
gajim – a Jabber/XMPP client Synopsis–h [-q ] [-v ] [-l subsystem=level ] [-p name ] [-c directory ] Descriptionis a Jabber/XMPP client written in Python and GTK+. works nicely with GNOME, yet it does not require it to run. is designed for novice and advanced users as one, as well for XMPP server admins….
gajim-remote – a remote control utility for gajim(1) Synopsiscommand Descriptionis a script to control and communicate with a running instance of gajim(1) by D-Bus. OptionsAvailable commands account_info Aq accountGets detailed info on a account add_contact Ao jid Ac Bq accountAdds contact to roster change_avatar Ao picture Ac Bq accountChange the avatar change_status Bo status Bc…
gajim-history-manager – a tool to manage gajim(1) logs Synopsis–h [-c directory ] Descriptionis a tool to manage Po do some cleanup Pc log file of gajim(1). Use this program to delete or export logs. For more information on database logs see <https://trac.gajim.org/wiki/LogsDatabase>. Options-h –help Show help options -c –config-path directory Where to look for logs…
gacutil – Global Assembly Cache management utility. Synopsisgacutil [-user] [command] [options] Descriptiongacutil is a tool used by developers to install versioned assemblies into the system Global Assembly Cache (GAC) to become part of the assemblies that are available for all applications at runtime. Notice that they are not directly available to the compiler. The convention…
gabbi – Gabbi Documentation Gabbi tests are expressed in YAML as a series of HTTP requests with their expected response: tests: – name: retrieve root GET: / status: 200This will trigger a GET request to / on the configured host. The test will pass if the response’s status code is 200. Test StructureThe top-level tests…
xrama – shows animated Ramachandran plots VERSION 4.0.1 Synopsisxrama -f traj.xtc -s topol.tpr -[no]h -nice int -b time -e time -dt time Descriptionxrama shows a Ramachandran movie, that is, it shows the Phi/Psi angles as a function of time in an X-Window. Static Phi/Psi plots for printing can be made with g_rama. Some of the…
xrama – shows animated Ramachandran plots VERSION 4.0.1 Synopsisxrama -f traj.xtc -s topol.tpr -[no]h -nice int -b time -e time -dt time Descriptionxrama shows a Ramachandran movie, that is, it shows the Phi/Psi angles as a function of time in an X-Window. Static Phi/Psi plots for printing can be made with g_rama. Some of the…
xpm2ps – convert XPM (XPixelMap) file to postscript VERSION 4.0.1 Synopsisxpm2ps -f root.xpm -f2 root2.xpm -di ps.m2p -do out.m2p -o plot.eps -xpm root.xpm -[no]h -nice int -[no]w -[no]frame -title enum -[no]yonce -legend enum -diag enum -size real -bx real -by real -rainbow enum -gradient vector -skip int -[no]zeroline -legoffset int -combine enum -cmin real -cmax…
xpm2ps – convert XPM (XPixelMap) file to postscript VERSION 4.0.1 Synopsisxpm2ps -f root.xpm -f2 root2.xpm -di ps.m2p -do out.m2p -o plot.eps -xpm root.xpm -[no]h -nice int -[no]w -[no]frame -title enum -[no]yonce -legend enum -diag enum -size real -bx real -by real -rainbow enum -gradient vector -skip int -[no]zeroline -legoffset int -combine enum -cmin real -cmax…
x2top – generates a primitive topology from coordinates VERSION 4.0.1 Synopsisx2top -f conf.gro -o out.top -r out.rtp -[no]h -nice int -ff string -[no]v -nexcl int -[no]H14 -[no]alldih -[no]remdih -[no]pairs -name string -[no]pbc -[no]pdbq -[no]param -[no]round -kb real -kt real -kp real Descriptionx2top generates a primitive topology from a coordinate file. The program assumes all hydrogens…
x2top – generates a primitive topology from coordinates VERSION 4.0.1 Synopsisx2top -f conf.gro -o out.top -r out.rtp -[no]h -nice int -ff string -[no]v -nexcl int -[no]H14 -[no]alldih -[no]remdih -[no]pairs -name string -[no]pbc -[no]pdbq -[no]param -[no]round -kb real -kt real -kp real Descriptionx2top generates a primitive topology from a coordinate file. The program assumes all hydrogens…
wheel – plots helical wheels VERSION 4.0.1 Synopsiswheel -f nnnice.dat -o plot.eps -[no]h -nice int -r0 int -rot0 real -T string -[no]nn Descriptionwheel plots a helical wheel representation of your sequence.The input sequence is in the .dat file where the first line contains the number of residues and each consecutive line contains a residuename. Files-f…
wheel – plots helical wheels VERSION 4.0.1 Synopsiswheel -f nnnice.dat -o plot.eps -[no]h -nice int -r0 int -rot0 real -T string -[no]nn Descriptionwheel plots a helical wheel representation of your sequence.The input sequence is in the .dat file where the first line contains the number of residues and each consecutive line contains a residuename. Files-f…
g_wham – weighted histogram analysis after umbrella sampling VERSION 4.0.1 Synopsisg_wham -o profile.xvg -hist histo.xvg -[no]h -nice int -[no]w -[no]xvgr -min real -max real -bins int -[no]prof -temp real -[no]flip -tol real DescriptionThis is an analysis program that implements the Weighted Histogram Analysis Method (WHAM). It is intended to analyze .pdo files generated by mdrun…
g_wham – weighted histogram analysis after umbrella sampling VERSION 4.0.1 Synopsisg_wham -o profile.xvg -hist histo.xvg -[no]h -nice int -[no]w -[no]xvgr -min real -max real -bins int -[no]prof -temp real -[no]flip -tol real DescriptionThis is an analysis program that implements the Weighted Histogram Analysis Method (WHAM). It is intended to analyze .pdo files generated by mdrun…
g_velacc – calculates velocity autocorrelation functions VERSION 4.0.1 Synopsisg_velacc -f traj.trr -s topol.tpr -n index.ndx -o vac.xvg -[no]h -nice int -b time -e time -dt time -[no]w -[no]xvgr -[no]m -[no]mol -acflen int -[no]normalize -P enum -fitfn enum -ncskip int -beginfit real -endfit real Descriptiong_velacc computes the velocity autocorrelation function. When the -m option is used,…
g_velacc – calculates velocity autocorrelation functions VERSION 4.0.1 Synopsisg_velacc -f traj.trr -s topol.tpr -n index.ndx -o vac.xvg -[no]h -nice int -b time -e time -dt time -[no]w -[no]xvgr -[no]m -[no]mol -acflen int -[no]normalize -P enum -fitfn enum -ncskip int -beginfit real -endfit real Descriptiong_velacc computes the velocity autocorrelation function. When the -m option is used,…