On my system: $ ulimit -n 1024 Some tools like GATK are aggressive in creating temporary files by creating more than 1000 files under /tmp/. This will cause the program to fail. How to increase the number of files allowed to be opened on Linux? To increase the max number of open files to 10240,…
How to write /etc/fstab entry for –bind mounting like mount –bind /home/hadoop/hdfs/store-tmp /home/store/tmp From man 8 mount: Since Linux 2.4.0 it is possible to remount part of the file hierarchy somewhere else. The call is mount –bind olddir newdir or shortoption mount -B olddir newdir or fstab entry is: /olddir /newdir none bind
We set up Xen F19 VMs on a Xen 3.4.3 / 2.6.32.13 xenified kernel. Check here.). However, we find the Xen VM keeps reporting: kernel netfront: Too many frags and skb rides the rocket in the dmsg. This solves the problem (assume in physical server vif1.0 is for the eth0 on the VM): On the…
The HDFS has a configuration in hdfs-site.xml to set the global replication number of blocks with the “dfs.replication” property. However, there are some “hot” files that are access by many nodes. How to increase the number of blocks for these certain files in HDFS? You can the replication number of certain file to 10: hdfs…
The logs I am processing is Hadoop log (log4j). It is in format like: 2014-09-20 21:55:11,855 INFO org.apache.hadoop.nfs.nfs3.IdUserGroup: Updated user map size: 36 2014-09-20 21:55:11,863 INFO org.apache.hadoop.nfs.nfs3.IdUserGroup: Updated group map size: 55 2014-09-20 22:10:11,907 INFO org.apache.hadoop.nfs.nfs3.IdUserGroup: Update cache now 2014-09-20 22:10:11,907 INFO org.apache.hadoop.nfs.nfs3.IdUserGroup: Not doing static UID/GID mapping because ‘/etc/nfs.map’ does not exist. Now, I…
Some important concepts in distributed system like Hadoop distributed file system, Google file system and so on. Answer from http://www.quora.com/Whats-the-difference-between-Reliability-Durability-and-Availability-for-data-storage-system The difference between durability and availability is fairly simple. Durability is about what happens when all power goes out everywhere. Has all data been written to stable storage that doesn’t require power (e.g. disk/flash), in…
How to read email in Maildir on Linux? You can use mutt by: mutt -f /path/to/mail/dir/
In Hadoop 2.5.0, I use ‘ps -aux’ and find the Java process has options: -Xmx1000m However, my nodes have 32GB memory. How to make Hadoop Java process heap larger? In yarn-env.sh, you can find: # For setting YARN specific HEAP sizes please use this # Parameter and set appropriately # YARN_HEAPSIZE=1000 In hadoop-env.sh, you can…
How to capture camera photo/video using MPlayer on Linux? You can watch the video from the camera by MPlayer: # mplayer tv:// Note that you need the root privilege to play the tv://. You can use mplayer to capture photos by: # mplayer -vo png -frames 3 tv:// If will store files 0000000{1..3}.png in the…
How to view .mbox files on Linux? Thunderbird can read mbox files well. You can drop your mbox files to the Local Folders directory of Thunderbird and restart Thunderbird. It will index the emails and show them. To find the Local Folders directory of Thunderbird: Open “Account Settings” and click on “Local Folders” to see…
How to find all available versions of a package in Ubuntu? To list available versions of a package: apt-cache showpkg <package-name> For example, to check all versions of thunderbird: $ sudo apt-cache showpkg thunderbird Package: thunderbird Versions: 1:31.1.1+build1-0ubuntu0.14.04.1 (/var/lib/apt/lists/archive.ubuntu.com_ubuntu_dists_trusty-updates_main_binary-amd64_Packages) (/var/lib/apt/lists/security.ubuntu.com_ubuntu_dists_trusty-security_main_binary-amd64_Packages) Description Language: File: /var/lib/apt/lists/archive.ubuntu.com_ubuntu_dists_trusty_main_binary-amd64_Packages MD5: 68ed1001b79d708ad48956a0c129114d Description Language: en File: /var/lib/apt/lists/archive.ubuntu.com_ubuntu_dists_trusty_main_i18n_Translation-en MD5: 68ed1001b79d708ad48956a0c129114d 1:31.0+build1-0ubuntu0.14.04.1 (/var/lib/dpkg/status)…
I find I sometimes lock the SSH terminal accidentally by ctrl-s on Linux. How to unlock/unfreeze it? Ctrl-s: lock the SSH terminal. Ctrl-q: unlock the SSH terminal.
How to find and change a user’s UID on Linux? Find the UID of a user: id -u $USER_NAME Change a user’s UID: # usermod -u $NEW_UID $USER_NAME
offlineimap actually does “synchronization”—if an email is deleted from the server, the email will be deleted from the local Maildir (http://offlineimap.org). This is good for mail sync. However, for backing up emails,one would like to keep the email even if it is deleted from the server. How to achieve this? You may use `getmail` which…
How to backup iPhone on Linux? Not using iTunes or Windows. You can backup iPhone using libimobiledevice. By the time I replied here, it supports up to iOS 7. Please check this post for a tutorial. Actually, the methods introduced can be used on Linux systems with the libimobiledevice installed. Backup iPhone: idevicebackup2 backup ~/iPhoneBackups/…
How to manage Linux console screen by commands? When the screen will be blanked? Put the screen into powerdown mode or power off the screen? 2 tools are useful for managing the console screen on Linux: setterm – set terminal attributes.vbetool – run real-mode video BIOS code to alter hardware state. When the screen will…
How to monitor temperatures of laptop on Linux? This works on Linux Mint: sudo aptitude install lm-sensors hddtemp For lm-sensors, first detect the sensors by: sudo sensors-detect To detect the temperature in the system: sudo sensors To detect the HDD (e.g. sda) temperature: sudo hddtemp /dev/sda An example of the output: [zma@mini:~]$ sudo sensors acpitz-virtual-0…
How to install the wireless driver in Linux Mint for HP Mini 110 Netbook? The bcmwl-kernel-source for Broadcom Linux STA driver works. You may need to connect the network first by the LAN cable or another wireless adapter. Open Control center -> System, Driver Management. After a while, it will ask you to select the…
The question is as follows. harry@debian:~/workshop1/qemu_test/version1/test$ qemu-system-x86_64 -hda qcow2.img -cdrom domU-x86_64-FS.img -boot d -m 1024 VNC server running on `::1:5900′ harry@debian:~/workshop1/qemu_test/version1/test$ vncviewer 127.0.0.1:1 vncviewer: ConnectToTcpAddr: connect: Connection refused Unable to connect to VNC server Solution (add -vnc parameter for qemu-system-x86_64): harry@debian:~/workshop1/qemu_test/version1/test$ qemu-system-x86_64 -hda qcow2.img -cdrom domU-x86_64-FS.img -boot d -m 1024 -vnc 127.0.0.1:2 harry@debian:~/workshop1/qemu_test/version1/test$ vncviewer 127.0.0.1:2…
How to boot Linux Mint to the console by default? (that is, the run level 3). 2 methods introduced here to boot Linux Mint to console/command line. Method 1 (may only work for earlier releases; check method 2 below): set kernel option. Edit /etc/default/grub and add text to GRUB_CMDLINE_LINUX_DEFAULT: GRUB_CMDLINE_LINUX_DEFAULT=”quiet splash text” Then, re-generate grub…